Class GenomicCoordinateError

Genomic coordinate validation errors

Hierarchy (View Summary)

ValidationError
- GenomicCoordinateError

Index

Constructors

Methods

forLargeCoordinate toString

Properties

code lineNumber? context? coordinate maxExpected coordinateType

Constructors

constructor

new GenomicCoordinateError(
    message: string,
    coordinate: number,
    maxExpected: number,
    coordinateType: "start" | "end" | "position",
    lineNumber?: number,
    context?: string,
): GenomicCoordinateError
Parameters
- message: string
- coordinate: number
- maxExpected: number
- coordinateType: "start" | "end" | "position"
- OptionallineNumber: number
- Optionalcontext: string
Returns GenomicCoordinateError
Overrides ValidationError.constructor
- Defined in src/errors.ts:613

Methods

`Static`forLargeCoordinate

forLargeCoordinate(
    coordinate: number,
    coordinateType?: "start" | "end" | "position",
    lineNumber?: number,
): GenomicCoordinateError
Create coordinate error for unusually large values
Parameters
- coordinate: number
- coordinateType: "start" | "end" | "position" = "position"
- OptionallineNumber: number
Returns GenomicCoordinateError
- Defined in src/errors.ts:628

toString

toString(): string
Create a user-friendly error message with context

Returns string
Overrides ValidationError.toString
- Defined in src/errors.ts:646

Properties

`Readonly`code

code: string

`Optional` `Readonly`lineNumber

lineNumber?: number

`Optional` `Readonly`context

context?: string

`Readonly`coordinate

coordinate: number

`Readonly`maxExpected

maxExpected: number

`Readonly`coordinateType

coordinateType: "start" | "end" | "position"