Function replaceAmbiguousBases

replaceAmbiguousBases(
sequence: GenotypeString,
replaceChar?: string,
): GenotypeString
Replace ambiguous bases with a standard character
Parameters
- sequence: GenotypeString
  Sequence with potential ambiguous bases
- OptionalreplaceChar: string
  Character to use for replacement (default: 'N')
Returns GenotypeString
Sequence with ambiguous bases replaced (same type as input)
Example
```
const clean = replaceAmbiguousBases('ATCGNR');
console.log(clean); // 'ATCGNN'

const withX = replaceAmbiguousBases('ATCGNR', 'X');
console.log(withX); // 'ATCGXX'
```
- Defined in packages/core/src/operations/core/sequence-manipulation.ts:297
replaceAmbiguousBases(sequence: string, replaceChar?: string): string
Replace ambiguous bases with a standard character
Parameters
- sequence: string
  Sequence with potential ambiguous bases
- OptionalreplaceChar: string
  Character to use for replacement (default: 'N')
Returns string
Sequence with ambiguous bases replaced (same type as input)
Example
```
const clean = replaceAmbiguousBases('ATCGNR');
console.log(clean); // 'ATCGNN'

const withX = replaceAmbiguousBases('ATCGNR', 'X');
console.log(withX); // 'ATCGXX'
```
- Defined in packages/core/src/operations/core/sequence-manipulation.ts:301