Variable FastqUtilsConst

Type Declaration

• detectFormat: (data: string) => boolean

  Detect if string contains FASTQ format data

• countSequences: (data: string) => number

  Count sequences in FASTQ data without parsing

• extractIds: (data: string) => string[]

  Extract sequence IDs without full parsing

• convertQuality: function

  • convertQuality(
        qualityString: string,
        fromEncoding: QualityEncoding,
        toEncoding: QualityEncoding,
    ): string

    Convert between quality encodings

    Parameters

    • qualityString: string
    • fromEncoding: QualityEncoding
    • toEncoding: QualityEncoding

    Returns string

• validateRecord: function

  • validateRecord(lines: string[]): { valid: boolean; error?: string }

    Validate FASTQ record structure

    Parameters

    • lines: string[]

    Returns { valid: boolean; error?: string }